Because I have diesels, I am an expert in noisy engines.
I used self-stick sound insulation from Hamilton Marine. It is expensive, but works very well. I used 1/8" aluminum "L" screwed to the bottoms of the decking around the edges, so that there would be protection for the insulation when the deck section is out, and used aluminum tape to seal between the aluminum "L" and the insulation itself.
This stuff is so effective that it cuts down the reflection in the engine compartment and really shuts things up.
http://store.hamiltonmar...browse.cfm/4,11634.html
1/8" Rubber foam tape under the edge of the floor panel where it touches the aluminum frames reduces the noise quite a bit. You can get good stuff from McMaster.com.
As jralbert notes, none of this is effective unless you seal the engines off from the cabin properly.
1975 32' Flybridge Sedan, twin Perkins 6-354 diesels, 1:1.53 velvetdrives, 16 X 19 props. Merritt Island, Florida